Package index • mrIML

All functions

cbind(): A cbind variation that ignores objects with zero dimention
filterRareCommon(): Filter rare response variables from the data
mrBootstrap(): Bootstrap mrIML model predictions
mrCoOccurNet(): Generate a MrIML co-occurrence network
mrCovar(): Investigate partial dependencies of a covariate for mrIML JSDMs (Joint Species Distribution Models)
mrFlashlight(): Convert mrIML object into a flashlight object
mrIML_bird_parasites_LM: An example mrIML model fit to MRFcov::Bird.parasites
mrIML_bird_parasites_RF: An example mrIML model fit to MRFcov::Bird.parasites
mrIMLperformance(): Calculate general performance metrics of a mrIML model
mrIMLpredicts(): Generates a multi-response predictive model
mrInteractions(): Calculate and visualize feature interactions
mrPdPlotBootstrap(): Bootstrap Partial Dependence Plots
mrPerformancePlot(): Plot Model Performance Comparison
mrShapely(): Generate SHAP (SHapley Additive exPlanations) Plots for Multiple Models and Responses
mrVip(): Calculates and helps interpret variable importance for mrIML models.
mrVipPCA(): Principal Component Analysis of mrIML variable importance
readSnpsPed(): Conversion to single column per locus from plink file via LEA functionality
resist_components(): Calculates resistance components from a list of pairwise resistance surfaces